Class: AnalysisSystematicReview

Inherits:
Object
  • Object
show all
Includes:
AnalysisSrStageMixin, Buhos::StagesMixin
Defined in:
lib/analysis_systematic_review.rb

Overview

A Facade pattern class Shows general statistics for systematic reviews and for each article

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods included from Buhos::StagesMixin

#get_stage_name, #get_stages_ids, #get_stages_names, #get_stages_names_t

Methods included from AnalysisSrStageMixin

#cd_accepted_id, #cd_from_pattern, #cd_id_assigned_by_user, #cd_rejected_id, #cd_screened_id, #cd_without_abstract, #cd_without_allocations, #count_by_pattern, #decisions_by_cd, #decisions_pattern, #get_asrs, #incoming_citations, #outgoing_citations, #resolution_by_cd, #resolution_pattern, #resolutions_f_pattern_decision, #stage_complete?, #user_decisions

Constructor Details

#initialize(rs) ⇒ AnalysisSystematicReview

Returns a new instance of AnalysisSystematicReview

Parameters:

  • rs —

    object Systematic_Review



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# File 'lib/analysis_systematic_review.rb', line 54

def initialize(rs)
  @rs=rs
  process_basic_indicators
  process_cite_number
  procesar_resolutions
end

Instance Attribute Details

#cd_ref_id ⇒ Object (readonly)

Id for canonical documents associated to references



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# File 'lib/analysis_systematic_review.rb', line 43

def cd_ref_id
  @cd_ref_id
end

#cd_reg_id ⇒ Object (readonly)

Id for canonical documents associated to records



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# File 'lib/analysis_systematic_review.rb', line 41

def cd_reg_id
  @cd_reg_id
end

#cd_todos_id ⇒ Object (readonly)

Id for all canonical documents



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# File 'lib/analysis_systematic_review.rb', line 45

def cd_todos_id
  @cd_todos_id
end

#rec ⇒ Object (readonly)

References between canonical documents



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# File 'lib/analysis_systematic_review.rb', line 47

def rec
  @rec
end

#ref_count_entrada ⇒ Object (readonly)

Hash for canonical documents, with incoming citations



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# File 'lib/analysis_systematic_review.rb', line 49

def ref_count_entrada
  @ref_count_entrada
end

#ref_count_salida ⇒ Object (readonly)

Hash for canonical documents, with out citations



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# File 'lib/analysis_systematic_review.rb', line 51

def ref_count_salida
  @ref_count_salida
end

#rs ⇒ Object (readonly)

Returns the value of attribute rs



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# File 'lib/analysis_systematic_review.rb', line 39

def rs
  @rs
end

Instance Method Details

#cd_count_entrada(id) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 63

def cd_count_entrada(id)
  @ref_count_entrada[id]
end

#cd_count_entrada_rtr(id) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 67

def cd_count_entrada_rtr(id)
  @cd_reference_rtr[id]
end

#cd_count_ref ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 75

def cd_count_ref
  @cd_ref_id.length
end

#cd_count_reg ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 79

def cd_count_reg
  @cd_reg_id.length
end

#cd_count_salida(id) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 71

def cd_count_salida(id)
  @ref_count_salida[id]
end

#cd_count_total ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 92

def cd_count_total
  @cd_todos_id.length
end

#cd_en_reference?(id) ⇒ Boolean

Señala si un cd es parte de una reference# Es decir, en algún momento fue citado por alguien.

Returns:

  • (Boolean) 


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# File 'lib/analysis_systematic_review.rb', line 89

def cd_en_reference?(id)
  @cd_ref_id.include? id
end

#cd_en_registro?(id) ⇒ Boolean

Señala si un cd es parte de un registro, es decir, si aparece en alguna de las searches

Returns:

  • (Boolean) 


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# File 'lib/analysis_systematic_review.rb', line 85

def cd_en_registro?(id)
  @cd_reg_id.include? id
end

#cd_hash ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 60

def cd_hash
  @rs.cd_hash
end

#cd_in_resolution_stage?(id, stage) ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'lib/analysis_systematic_review.rb', line 136

def cd_in_resolution_stage?(id, stage)
  @cd_resolutions[stage.to_sym][id].nil? ? false : @cd_resolutions[stage.to_sym][id][:resolution] == 'yes'
end

#files_by_cd ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 152

def files_by_cd
  $db["SELECT a.*,cds.canonical_document_id FROM files a INNER JOIN file_cds cds ON a.id=cds.file_id INNER JOIN file_srs ars ON a.id=ars.file_id WHERE systematic_review_id=? AND (cds.not_consider = ? OR cds.not_consider IS NULL)", @rs.id, 0].to_hash_groups(:canonical_document_id)
end

#more_cited(n = 20) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 140

def more_cited(n=20)
  @ref_count_entrada.sort_by {|a| a[1]}.reverse[0...n]
end

#pattern_from_s(text) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 169

def pattern_from_s(text)
  text.split("__").inject({}){|ac,v|
    key,value=v.split("_")
    ac[key]=value.to_i
    ac
  }
end

#pattern_id(a) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 163

def pattern_id(a)
  Decision::N_EST.keys.map {|key|
    "#{key}_#{a[key]}"
  }.join("__")
end

#pattern_name(a) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 157

def pattern_name(a)
  Decision::N_EST.map {|key,name|
    "#{::I18n::t(name)}:#{a[key]}"
  }.join(";")
end

#pattern_order(a) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 147

def pattern_order(a)
  - (1000*a["yes"].to_i + 100*a["no"].to_i + 10*a["undecided"].to_i + 1*a["ND"].to_i)
end

#with_more_references(n = 20) ⇒ Object 



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# File 'lib/analysis_systematic_review.rb', line 143

def with_more_references(n=20)
  @ref_count_salida.sort_by {|a| a[1]}.reverse[0...n]
end